| Name | Address | Enrollment | Grade span |
|---|---|---|---|
| East High (Continuation) School | 392 16th Street | 26 | 9-12 |
| Eel River Community School | 2292 Newburg Road | 27 | 7-12 |
| Fortuna Adult Education School | 379 12th Street | - | - |
| Fortuna Middle School | 843 L Street | 277 | 6-8 |
| Fortuna Union High School | 379 12th Street | 354 | 9-12 |
| Norman G. Ambrosini Elementary School | 3850 Rohnerville Road | 153 | K-4 |
| South Fortuna Elementary School | 2089 Newburg Road | 234 | K-5 |
| Strongs Creek Community Day School | 922 N Street | 11 | 9-10 |
| Toddy Thomas Elementary School | 2800 Thomas Street | 331 | 4-8 |
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